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Biogeochemical aspects of bottom anoxia in a Mediterranean lagoon (Thau, France) ArchiMer
Souchu, Philippe; Gasc, Anne; Collos, Y; Vaquer, A; Tournier, Henri; Bibent, B; Deslous-paoli, Jean-marc.
Physical and chemical characteristics (temperature, salinity, dissolved oxygen), nutrients [dissolved inorganic nitrogen (DIN), soluble reactive phosphorus (SRP) and silicate], dissolved organic nitrogen (DON) and phosphorus and particulate matter [particulate organic carbon (POC) and nitrogen (PON) and chlorophyll a] were measured at a station located in the deepest part of the Thau lagoon (8.5 m), France, during a 10 d period of bottom anoxia in summer 1994. The upper 8 cm of sediment were also analyzed for ammonium (NH(4)(+)) and SRP concentrations in the porewater. The study period was characterized by mean wind speed under 4 m s(-1) which induced an increase of surface temperature from 18 to 29 degrees C with the formation of a thermocline. The...
Tipo: Text Palavras-chave: Anoxia; Nitrogen; Phosphorus; Eutrophication; Thau lagoon; Mediterranean Sea.
Ano: 1998 URL: http://archimer.ifremer.fr/doc/00070/18142/15694.pdf
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Contamination de l'etang de Thau par Alexandrium tamarense. Episode de novembre a decembre 1998 ArchiMer
Abadie, Eric; Zouher, Amzil; Belin, Catherine; Comps, Marie-annick; Elziere-papayanni, Panayota; Lassus, Patrick; Le Bec, Claude; Marcaillou-le Baut, Claire; Nezan, Elizabeth; Poggi, Robert.
A bloom of the toxic dinoflagellate Alexandrium tamarense was observed for the first time in Thau iagoon between November and December 1998. Maximum cell concentrations detected in shellfish farming areas (85 000 Cells/1) were high enough to make mussels and clams unsuitable for human consumption (max. 850 ug. STX eq.100 g'1) while toxic levels in oysters did not exceed, or even reach, the international public health threshold established for PSP toxins. This event, new to French Mediterranean waters, was investigated by both local and national veterinary services and by the Ifremer teams involved in the National Monitoring Network for Phytoplankton and Phycotoxines (Réphy). The chronological and operational description of the event was compared with data...
Tipo: Text Palavras-chave: Alexandrium; Monitoring; Toxic dinoflagellates; Thau lagoon; Alexandrium; Surveillance; Dinoflagellés toxiques; Etang de Thau.
Ano: 1999 URL: http://archimer.ifremer.fr/doc/1999/rapport-884.pdf
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Ecologie du copépode calanoïde Paracartia grani. Implication dans le cycle de vie du parasite Marteilia refringens dans la lagune de Thau ArchiMer
Boyer, Séverine.
In this study, the life cycle of Paracartia grani, a calalloid copepod belonging to the Acartiidae family was determined in Thau lagoon. Indeed, the copepod involvement in the life cycle of the parasite Marteilia refringens affecting the bivalve productions is suspected. Mesozooplanktonic community .was monitored twice a month. over two years at a fixed station in the lagoon. Sampling has identified P. grani as the acartiid dominant species in summer. From April to January, the copepod is found in the water column while from February to early April it remains in the sediment as diapausing eggs. The analysis of the population structure (size spectmm, contribution of developmental stages and sex ratio) has revealed that there are in between 6 and 9...
Tipo: Text Palavras-chave: Paracartia grani; Cycle de vie; Production d'oeufs; Oeufs de diapause; Mésozooplancton; Marteilia refringens; Mytilus galloprovincialisa; Ruditapes decussatus; PCR; Hybridation in situ; Lagune de Thau; Paracartia grani; Life cycle; Egg production; Diapause eggs; Mesozooplankton; Marteilia refringens; Mytilus galloprovincialis; Ruditapes decussatus; PCR; In situ hybridization; Thau lagoon.
Ano: 2012 URL: http://archimer.ifremer.fr/doc/00118/22931/21482.pdf
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Effects of experimental warming on small phytoplankton, bacteria and viruses in autumn in the Mediterranean coastal Thau Lagoon ArchiMer
Courboulès, Justine; Vidussi, Francesca; Soulié, Tanguy; Mas, Sébastien; Pecqueur, David; Mostajir, Behzad.
To investigate the responses of a natural microbial plankton community of coastal Mediterranean waters to warming, which are still poorly known, an in situ mesocosm experiment was carried out in Thau Lagoon during autumn 2018. Several microorganisms, including virio-, bacterio-, and phytoplankton < 10 µm in size, were monitored daily and analysed using flow cytometry for 19 consecutive days in six mesocosms. Three mesocosms (control) had the same natural water temperature as the lagoon, and the other three were warmed by + 3 °C in relation to the control temperature. The cytometric analyses revealed an unexpected community dominated by picophytoplanktonic cells, including Prochlorococcus-like and Picochlorum-like cells, which had not previously been...
Tipo: Text Palavras-chave: Pico- and nanophytoplankton; Bacterioplankton; Virus; Warming; In situ mesocosm; Thau lagoon.
Ano: 2021 URL: https://archimer.ifremer.fr/doc/00688/79979/82933.pdf
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Étude et modélisation des populations de macrophytes dans la lagune de Thau (Hérault, France) ArchiMer
Plus, Martin.
The works carried out can be divided in three main lines : design and management of experimental studies on primary production processes, macrophyte spatial distribution study and development of macrophyte and seagrass numerical models. In situ and in vitro experiments have been performed with the aim of studying the processes and the parameters involved in the photosynthesis-respiration system, as well as to establish the main biotic (self-shading effect, physiology of the photosynthesis, carbon, nitrogen and chlorophyll tissu contents) and abiotic (temperature, light and nutrients) factors controlling macrobenthic primary production. A seagrass ecosystem model based on nitrogen and oxygen fluxes has been developped. Model calibration and validation have...
Tipo: Text Palavras-chave: Primary production; Light; Nitrogen; Nutrients; Mathematical model; Thau lagoon; Seagrass; Macrophytes; Production primaire; Lumière; Azote; Nutriments; Model mathématique; Thau; Phanérogames; Macrophytes.
Ano: 2001 URL: http://archimer.ifremer.fr/doc/2001/these-6518.pdf
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Implementation of a 3D Coupled Hydrodynamic and Contaminant Fate Model for PCDD/Fs in Thau Lagoon (France): The Importance of Atmospheric Sources of Contamination ArchiMer
Dueri, Sibylle; Marinov, Dimitar; Fiandrino, Annie; Tronczynski, Jacek; Zaldivar, Jose-manuel.
A 3D hydrodynamic and contaminant fate model was implemented for polychlorinated dibenzo-p-dioxins and dibenzofurans (PCDD/Fs) in Thau lagoon. The hydrodynamic model was tested against temperature and salinity measurements, while the contaminant fate model was assessed against available data collected at different stations inside the lagoon. The model results allow an assessment of the spatial and temporal variability of the distribution of contaminants in the lagoon, the seasonality of loads and the role of atmospheric deposition for the input of PCDD/Fs. The outcome suggests that air is an important source of PCDD/Fs for this ecosystem, therefore the monitoring of air pollution is very appropriate for assessing the inputs of these contaminants. These...
Tipo: Text Palavras-chave: PCDD/F; Thau lagoon; POPs; Fate model; Hydrodynamic model.
Ano: 2010 URL: https://archimer.ifremer.fr/doc/00003/11441/7995.pdf
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Influence of shellfish farming activities on nitrification, nitrate reduction to ammonium and denitrification at the water-sediment interface of the Thau lagoon, France ArchiMer
Gilbert, F; Souchu, Philippe; Bianchi, M; Bonin, P.
The seasonal patterns of nitrification, denitrification and dissimilatory ammonium production (DAP) rates were studied in the sediment of 2 stations in the Thau lagoon (south of France). The station ZA was located within the shellfish farming zone and the station B was the reference site. A marked effect of shellfish fanning on bacterial activities was observed. Spatial differences were associated with discrepancies in the organic content and the reduction state of sediments, i.e. highest reductive processes (denitrification and DAP) were noted in shellfish farming area, whereas the oxidative process (nitrification) was predominant outside the farming zone. At both stations, the DAP activity increased in September (autumn) concomitant with an increase of...
Tipo: Text Palavras-chave: Shellfish farming; Nitrogen bacterial processes; Nitrification; Nitrate reduction to ammonium; Denitrification; Thau lagoon; Mediterranean Sea; Sediment-water exchanges.
Ano: 1997 URL: http://archimer.ifremer.fr/doc/00070/18145/15697.pdf
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Influence of shellfish farming activities on the biogeochemical composition of the water column in Thau lagoon ArchiMer
Souchu, Philippe; Vaquer A, André; Collos, Yves; Landrein, Sonia; Deslous-paoli, Jean-marc; Bibent, Bertrand.
Thau lagoon is a Mediterranean shellfish ecosystem with large biomasses of oysters growing in waters with high residence time due to low tidal ranges, The influence of filter feeders (oysters and their epibiota) on the spatial distribution of particulate and dissolved compounds in the water column of Thau lagoon was studied through its variation with time, In 1991/1992, daily variations were investigated in pens, corridors and outside shellfish farming zones for nutrients, chlorophyll a and primary production. Salinity, dissolved oxygen, nutrients, organic matter and chlorophyll a were also monitored in surface waters inside and outside shellfish farming zones each week from January 1993 to March 1994. The presence of shellfish farms led to a decrease by...
Tipo: Text Palavras-chave: Thau lagoon; Carrying capacity; Nutrient cycling; Phytoplankton; Suspension feeding bivalves.
Ano: 2001 URL: http://archimer.ifremer.fr/doc/2001/publication-808.pdf
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Investigating an avian source of shellfish faecal contamination in the Thau lagoon (the Mediterranean, France) ArchiMer
Derolez, Valerie; Serais, Ophelie; Caprais, Marie-paule; Le Saux, Jean-claude; Messiaen, Gregory.
Microbes regularly contaminate Thau lagoon shellfish. Between 1997 and 2007, 18% of the analyses carried out in dry weather recorded more than 230 Escherichia coli / 100 g of bivalves (Ifremer French microbial monitoring network), leading the administration to restrict the shellfish harvest area, including suspension of production. This study aims to determine, the contribution of seabirds, which roost at night on the Thau lagoon shellfish growing frames, to shellfish faecal pollution in dry weather.Data were collected in 2008 from both the drainage area (pollution input) and the lagoon (water quality and microbial monitoring, seabird counts) in dry weather. The data showed that, with no watershed input or lagoon resurgence, microbial contaminants were...
Tipo: Text Palavras-chave: Escherichia coli; Origine aviaire; Coquillage; Contamination fécale; Étang de Thau; Oiseau de mer; Bactériophage; Dépistage de la source microbienne; Temps sec; Escherichia coli; Avian source; Shellfish; Faecal contamination; Thau lagoon; Seabird; Bacteriophage; Microbial source tracking; Dry weather.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/00025/13593/10659.pdf
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Modelling of oxygen and nitrogen cycling as a function of macrophyte community in the Thau lagoon ArchiMer
Plus, Martin; Chapelle, Annie; Lazure, Pascal; Auby, Isabelle; Levavasseur, G; Verlaque, M; Belsher, Thomas; Deslous-paoli, Jean-marc; Zaldivar, J; Murray, C.
A three-dimensional model coupling physical and biological processes for the whole Than lagoon (Mediterranean coast of France) was developed in order to assess the relationships between macrophytes and the oxygen and nitrogen cycles. Ten species have been inserted as forcing variables in the model. Plankton dynamics, shellfish cultivation impact and mineralization of organic matter are also considered, as well as nutrient and oxygen exchanges between the sediment and the water column. Simulations with and without the macrophytes have shown that the system can be characterized as having a highly structured pattern involving lagoon nitrogen and oxygen cycles. This pattern is created by the combined influence of macrophytes, watershed and oyster farming....
Tipo: Text Palavras-chave: Thau lagoon; Biogeochemical cycles; Ecological modelling; Macrophytes.
Ano: 2003 URL: https://archimer.ifremer.fr/doc/2003/publication-459.pdf
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Modelling seasonal dynamics of biomasses and nitrogen contents in a seagrass meadow (Zostera noltii Hornem.): application to the Thau lagoon (French Mediterranean coast) ArchiMer
Plus, Martin; Chapelle, Annie; Menesguen, Alain; Deslous-paoli, Jean-marc; Auby, Isabelle.
A numerical deterministic model for a seagrass ecosystem (Zostera noltii meadows) has been developed for the Thau lagoon. It involves both above- and belowground seagrass biomasses, nitrogen quotas and epiphytes. Driving variables are light intensity, wind speed, rain data and water temperature. This seagrass model has been coupled to another biological model in order to simulate the relative contributions of each primary producer to: (i) the total ecosystem production, (ii) the impact on inorganic nitrogen and (iii) the fluxes towards the detritus compartment. As a first step in the modelling of seagrass beds in the Thau lagoon, the model has a vertical structure based on four boxes (a water box on top of, three sediment boxes) and the horizontal...
Tipo: Text Palavras-chave: Thau lagoon; Nitrogen cycle; Oxygen cycle; Box model; Seagrass ecosystem.
Ano: 2003 URL: https://archimer.ifremer.fr/doc/2003/publication-461.pdf
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Modelling water discharges and nitrogen inputs into a Mediterranean lagoon - Impact on the primary production ArchiMer
Plus, Martin; La Jeunesse, I; Bouraoui, F; Zaldivar, J; Chapelle, Annie; Lazure, Pascal.
The Soil and Water Assessment Tool (SWAT model, 2001 Version) has been applied to the Than lagoon catchment area in order to simulate water discharges and nutrient inputs into the lagoon over a 10 years period (1989-1999), and to provide routing inflows to a previously developed lagoon ecosystem model. The watershed model has been calibrated and validated using measured data available for the two main rivers. The results indicate that the mean annual nitrogen inputs into the Thau lagoon is 117 +/- 57 tons y(-1), with the two main rivers, contributing for 80% of total annual nitrogen export. The variations of outputs to the lagoon are nonetheless important from 1 year to another. Due to the local agricultural practices and a reduced in-stream natural...
Tipo: Text Palavras-chave: Thau lagoon; Primary production; Integrated modelling; Lagoon model; Watershed model.
Ano: 2006 URL: http://archimer.ifremer.fr/doc/2006/publication-1118.pdf
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Molecular approach indicates consumption of jellyfish by commercially important fish species in a coastal Mediterranean lagoon ArchiMer
Marques, Raquel; Darnaude, Audrey M.; Crochemore, Sandrine; Bouvier, Corinne; Bonnet, Delphine.
Until recently, jellyfish have been ignored as an important source of food, due to their low nutritional value. Here, quantitative PCR was used to detect and quantify the DNA of the jellyfish Aurelia coerulea in the gut contents of commercially important fish species from the Thau Lagoon. Individuals from five fish species were collected during two different periods: the bloom period, when the pelagic stages of A. coerulea are abundant, and the post-bloom period, when only the benthic stage – polyps – is present in the lagoon. The DNA of A. coerulea was detected in the guts of 41.9% of the fish analysed, belonging to four different species. The eel Anguilla anguilla and the seabream Sparus aurata were important jellyfish consumers during the bloom and...
Tipo: Text Palavras-chave: Predation; Aurelia coerulea; Eel; Seabream; Polyps; Medusae; Quantitative PCR; Gut content; Thau lagoon.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00513/62469/66986.pdf
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Oligotrophication and emergence of picocyanobacteria and a toxic dinoflagellate in Thau lagoon, southern France ArchiMer
Collos, Yves; Bec, Beatrice; Jauzein, Cecile; Abadie, Eric; Laugier, Thierry; Lautier, Jacques; Pastoureaud, Annie; Souchu, Philippe; Vaquer, Andre.
Time series data have been examined in Thau lagoon (Southern France) from 1972 to 2006 for water temperature, salinity, nutrients and from 1987 to 2006 for phytoplankton. A first main trend identified is an increase in mean annual water temperature (1.5 degrees C over 33 years or 0.045 degrees C/year) that was not evenly distributed among seasons. The highest rate of increase was in the spring (+ 3.0 degrees C over 33 years), followed by summer (+ 2.0 degrees C and fall (+ 1.7 degrees C. In winter, no significant increase over the 33 year period could be found. A second clear trend is a large decrease in soluble reactive phosphorus (SRP) concentration over the same 33 year period (summer values decreased from 10 mu M to 1 mu M. while winter values...
Tipo: Text Palavras-chave: Skeletonema costatum; Alexandrium catenella; Picocyanobacteria; Oligotrophication; Long term variability; Thau lagoon.
Ano: 2009 URL: http://archimer.ifremer.fr/doc/2009/publication-6420.pdf
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Reading Ecosystem Services at the Local Scale through a Territorial Approach: the Case of Peri-Urban Agriculture in the Thau Lagoon, Southern France Ecology and Society
Ruoso, Laure-Elise; Institute for Sustainable Futures, University of Technology, Sydney, Australia; UMR TETIS, AgroParisTech, CIRAD, IRSTEA, Montpellier, France ; laure-elise.ruoso@student.uts.edu.au; Plant, Roel; Institute for Sustainable Futures, University of Technology, Sydney, Australia; roel.plant@uts.edu.au; Maurel, Pierre; UMR TETIS, AgroParisTech, CIRAD, IRSTEA, Montpellier, France ; pierre.maurel@irstea.fr; Dupaquier, Claire; UMR TETIS, AgroParisTech, CIRAD, IRSTEA, Montpellier, France ; claire.dupaquier@teledetection.fr; Roche, Philip K.; UR EMAX, TR SEDYVIN, IRSTEA Aix en Provence, France; philip.roche@irstea.fr; Bonin, Muriel; UMR TETIS, CIRAD Montpellier, France; muriel.bonin@cirad.fr.
In recent years, the ecosystem services (ES) concept has become a major paradigm for natural resource management. While policy-makers demand &#8220;hard&#8221; monetary evidence that nature conservation would be worth investing in, ongoing attempts are being made to formalize the concept as a scientifically robust &#8220;one size fits all&#8221; analytical framework. These attempts have highlighted several major limitations of the ES concept. First, to date, the concept has paid little attention to the role of humans in the production of ES. Second, the ongoing formalization of the ES concept is turning it into a &#8220;technology of globalization,&#8221; thereby increasingly ignoring the socio-cultural context and history within...
Tipo: Peer-Reviewed Insight Palavras-chave: Ecosystem services; Local land use planning; Participatory methods; Stakeholder perception; Territorial approach; Thau lagoon.
Ano: 2015
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REseau MOllusques des Rendements Aquacoles de l'huître creuse Crassostrea gigas sur les côtes françaises (REMORA). Résultats de la lagune de Thau pour l'année 2003. ArchiMer
Le Gall, Patrik; Lagarde, Franck; Pichot, Yves; Vercelli, Catherine.
The monitoring network IFREMER/REMORA in Thau lagoon is assessing, on a yearly basis, mortality, growth and quality criteria distributed among 6 stations. Samplings are carried out in March, June, September and December. 2003 is a year with a very important mortality in Mèze and Marseillan area due to an anoxy and an anormal mortality at Bouzigues Nord in december. The growth rate is always better than others French oysters areas. Afnor index is high (beetwen 13.7 and 16.5 in december), so the totality of the oysters are classifed in "Spéciales". Polydora sp. Index is important but the initial stock was first infected. The valve quality is good, with no gelatine, except on Bouzigues South.
Tipo: Text Palavras-chave: REMORA; France; Lagune de Thau; Huître creuse; Crassostrea gigas; Mortalité; Croissance; Qualité; Polydora; REMORA; France; Thau lagoon; Cupped oyster; Crassostrea gigas; Mortality; Growth; Quality; Polydora.
Ano: 2005 URL: http://archimer.ifremer.fr/doc/00113/22384/20079.pdf
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Response of diatom and dinoflagellate lifeforms to reduced phosphorus loading: a case study in the Thau lagoon, France ArchiMer
Gowen, R. J.; Collos, Y.; Tett, P.; Scherer, C.; Bec, B.; Abadie, Eric; Allen, M.; O'Brien, T..
The basin of Thau in southern France is a shallow, weakly flushed lagoon which is an important location for oyster cultivation. Phytoplankton analyses were carried out in 1975-1976 and then (almost) continuously since 1987. We report an investigation of 'the balance of organisms' in phytoplankton in relation to reductions in phosphorus loading, using two new tools based on phytoplankton lifeforms: the Plankton Index for Phytoplankton (PIp); Euclidean distance in state space. Our results show the utility of the tools for analysing changes in the ‘balance of organisms’ at the level of functional groups (in our study diatoms and dinoflagellates), but also illustrate the difficulties in demonstrating the reversal of human impacts resulting from eutrophication....
Tipo: Text Palavras-chave: Eutrophication; Thau lagoon; Phosphorus; Lifeform; State-space; Euclidean distance.
Ano: 2015 URL: https://archimer.ifremer.fr/doc/00257/36817/35449.pdf
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Seasonal variations in photosynthetic irradiance response curves of macrophytes from a Mediterranean coastal lagoon ArchiMer
Plus, Martin; Auby, Isabelle; Verlaque, Marc; Levavasseur, Guy.
The main photosynthesis and respiration parameters (dark respiration rate, light saturated production rate, saturation irradiance, photosynthetic efficiency) were measured on a total of 23 macrophytes of the Than lagoon (2 Phanerogams, 5 Chlorophyceae, 10 Rhodophyceae and 6 Phaeophyceae). Those measurements were performed in vitro under controlled conditions, close to the natural ones, and at several seasons. Concomitantly, measurements of pigment concentrations, carbon, phosphorous and nitrogen contents in tissues were performed. Seasonal intra-specific variability of photosynthetic parameters was found very high, enlightening an important acclimatation capacity. The highest photosynthetic capacities were found for Chlorophyceae (e.g. Monostroma obscurum...
Tipo: Text Palavras-chave: Thau lagoon; Phaeophyceae; Rhodophyceae; Chlorophyceae; Seagrasses; Seasonal variations; Oxygen method; Macrophytes; Light response curve; Photosynthesis.
Ano: 2005 URL: http://archimer.ifremer.fr/doc/2005/publication-465.pdf
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Trophic environments influence size at metamorphosis and recruitment performance of Pacific oysters ArchiMer
Lagarde, Franck; Richard, Marion; Bec, Beatrice; Roques, Cecile; Mortreux, Serge; Bernard, Ismael; Chiantella, Claude; Messiaen, Gregory; Nadalini, Jean-bruno; Hori, Masakazu; Hamaguchi, Masami; Pouvreau, Stephane; Roque D'Orbcastel, Emmanuelle; Tremblay, Rejean.
Reproduction and recruitment of benthic invertebrates are influenced by the climate and by the ecological structure of marine ecosystems, along with local anthropogenic pressures such as eutrophication or oligotrophication. Using the Pacific oyster Crassostrea gigas as a biological model, we tested the hypothesis that the variability in prodissoconch II (PII) size (i.e. size at metamorphosis) depends on ecological functioning. Settlement and recruitment were assessed at 5 sampling sites on the French Mediterranean shellfish farmed Thau lagoon during the main summer recruitment events in 3 consecutive years (2012-2014). Hydrobiological and planktonic analyses were conducted at 3 sampling sites. Our results showed that recruitment was extremely...
Tipo: Text Palavras-chave: Larval ecology; Recruitment; Prodissoconch II; Crassostrea gigas; Oligotrophication; Cryptophytes; Thau lagoon.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00454/56613/58334.pdf
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Wind and temperature controls on Alexandrium blooms (2000-2007) in Thau lagoon (Western Mediterranean) ArchiMer
Laanaia, Nabil; Vaquer, Andre; Fiandrino, Annie; Genovesi, Benjamin; Pastoureaud, Annie; Cecchi, Philippe; Collos, Yves.
Since 1998, blooms of Alexandrium catenella/tamarense in the lagoon of Thau developed regularly each autumn, reaching a maximum of several millions cells per liter in 2004. By contrast, spring blooms occurred only twice (in 2000 and 2007). During these periods, sea surface temperatures (SST) and the wind patterns appear to impact the bloom occurrences much more than the apparent limiting resources such as inorganic nutrients. The analysis of SST and wind from April to June and September to November (from 2000 to 2007) indicates first that there has to be an initial wind stress in order to resuspend the cysts buried in the sediment. Blooms then occur after a period of weak winds (<4 m s(-1)) and of stable SST close to 20 degrees C (+/- 2 degrees C)....
Tipo: Text Palavras-chave: Alexandrium catenella/tamarense; Wind stress; SST; Thau lagoon; Mediterranean.
Ano: 2013 URL: http://archimer.ifremer.fr/doc/00157/26790/24936.pdf
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